Index

A

alphas (trtoolbox.globalanalysis.RateConstants attribute) (trtoolbox.lda.Results attribute) append_ldamap() (trtoolbox.plothelper.PlotHelper static method) artefact (trtoolbox.globalanalysis.Results attribute) ax_spectra (trtoolbox.plothelper.PlotHelper attribute)

ax_traces (trtoolbox.plothelper.PlotHelper attribute) axalpha (trtoolbox.plothelper.PlotHelper attribute) axcolor (trtoolbox.plothelper.PlotHelper attribute) axfreq (trtoolbox.plothelper.PlotHelper attribute) axs_lda (trtoolbox.plothelper.PlotHelper attribute) axtime (trtoolbox.plothelper.PlotHelper attribute)

C

calc_lcurve() (in module trtoolbox.lda) calc_r2() (in module trtoolbox.globalanalysis) calculate_error() (in module trtoolbox.expfit) (in module trtoolbox.globalanalysis) calculate_estimate() (in module trtoolbox.globalanalysis) calculate_fitdata() (in module trtoolbox.globalanalysis) convert_tcs() (in module trtoolbox.globalanalysis)

create_kmatrix() (trtoolbox.globalanalysis.RateConstants method) create_profile() (in module trtoolbox.globalanalysis) create_tr() (in module trtoolbox.expfit) create_tr_expfit() (in module trtoolbox.globalanalysis) create_tr_odeint() (in module trtoolbox.globalanalysis) create_traces() (trtoolbox.expfit.Results method) create_xas() (in module trtoolbox.globalanalysis)

D

data (trtoolbox.expfit.Results attribute) dmatrix (trtoolbox.lda.Results attribute) do_interpolate() (trtoolbox.plothelper.PlotHelper static method)

dofit() (in module trtoolbox.expfit) doglobalanalysis() (in module trtoolbox.globalanalysis) dolda() (in module trtoolbox.lda) dosvd() (in module trtoolbox.svd)

E

estimates (trtoolbox.globalanalysis.Results attribute)

F

fig_lda (trtoolbox.plothelper.PlotHelper attribute) fig_spectra (trtoolbox.plothelper.PlotHelper attribute) fig_traces (trtoolbox.plothelper.PlotHelper attribute)

fit (trtoolbox.expfit.Results attribute) fitdata (trtoolbox.globalanalysis.Results attribute) (trtoolbox.lda.Results attribute) fittraces (trtoolbox.globalanalysis.Results attribute)

G

gen_alphas() (in module trtoolbox.lda) gen_dmatrix() (in module trtoolbox.lda) gen_lmatrix() (in module trtoolbox.lda)

gen_taus() (in module trtoolbox.lda) get_alpha() (trtoolbox.lda.Results method) get_xk() (trtoolbox.lda.Results method)

I

inversesvd() (in module trtoolbox.lda)

is_square() (in module trtoolbox.globalanalysis)

K

k (trtoolbox.lda.Results attribute) kmatrix (trtoolbox.globalanalysis.RateConstants attribute)

ks (trtoolbox.globalanalysis.RateConstants attribute) ks_err (trtoolbox.globalanalysis.RateConstants attribute)

L

l1_lda (trtoolbox.plothelper.PlotHelper attribute) l1_spectra (trtoolbox.plothelper.PlotHelper attribute) l1_traces (trtoolbox.plothelper.PlotHelper attribute) l2_spectra (trtoolbox.plothelper.PlotHelper attribute)

l2_traces (trtoolbox.plothelper.PlotHelper attribute) lcurve (trtoolbox.lda.Results attribute) ldadata (trtoolbox.plothelper.PlotHelper attribute) lmatrix (trtoolbox.lda.Results attribute)

M

map_lda (trtoolbox.plothelper.PlotHelper attribute) method (trtoolbox.globalanalysis.Results attribute) (trtoolbox.lda.Results attribute)

midpoint (trtoolbox.plothelper.MidpointNormalize attribute) MidpointNormalize (class in trtoolbox.plothelper) model() (in module trtoolbox.globalanalysis)

N

n (trtoolbox.svd.Results attribute)

nb_exps (trtoolbox.globalanalysis.RateConstants attribute)

O

offset (trtoolbox.globalanalysis.Results attribute) opt_func() (in module trtoolbox.expfit)

opt_func_est() (in module trtoolbox.globalanalysis) opt_func_raw() (in module trtoolbox.globalanalysis) opt_func_svd() (in module trtoolbox.globalanalysis)

P

plot_abstract_spectra() (trtoolbox.svd.Results method) plot_abstract_traces() (trtoolbox.svd.Results method) plot_contourmap() (trtoolbox.plothelper.PlotHelper static method) plot_data() (trtoolbox.svd.Results method) plot_fitdata() (trtoolbox.globalanalysis.Results method) (trtoolbox.lda.Results method) plot_fitdata_3d() (trtoolbox.globalanalysis.Results method) (trtoolbox.lda.Results method) plot_heatmap() (trtoolbox.plothelper.PlotHelper method) plot_lcurve() (trtoolbox.lda.Results method) plot_ldamap() (trtoolbox.lda.Results method) plot_ldaresults() (trtoolbox.plothelper.PlotHelper method) plot_profile() (trtoolbox.globalanalysis.Results method) plot_results() (trtoolbox.expfit.Results method) (trtoolbox.globalanalysis.Results method) (trtoolbox.lda.Results method) (trtoolbox.svd.Results method) plot_results_traces() (trtoolbox.expfit.Results method)

plot_solutionvector() (trtoolbox.lda.Results method) (trtoolbox.plothelper.PlotHelper method) plot_spectra() (trtoolbox.globalanalysis.Results method) (trtoolbox.lda.Results method) (trtoolbox.plothelper.PlotHelper method) (trtoolbox.svd.Results method) plot_surface() (trtoolbox.plothelper.PlotHelper method) plot_svddata() (trtoolbox.svd.Results method) plot_svddata_3d() (trtoolbox.svd.Results method) plot_traces() (trtoolbox.globalanalysis.Results method) (trtoolbox.lda.Results method) (trtoolbox.plothelper.PlotHelper method) (trtoolbox.svd.Results method) plot_xas() (trtoolbox.globalanalysis.Results method) PlotHelper (class in trtoolbox.plothelper) pre (trtoolbox.expfit.Results attribute) print_results() (trtoolbox.expfit.Results method) (trtoolbox.globalanalysis.Results method) profile (trtoolbox.globalanalysis.Results attribute)

R

r2 (trtoolbox.globalanalysis.Results attribute) rate_constants (trtoolbox.globalanalysis.Results attribute) RateConstants (class in trtoolbox.globalanalysis) reconstruct() (in module trtoolbox.svd)

Results (class in trtoolbox.expfit) (class in trtoolbox.globalanalysis) (class in trtoolbox.lda) (class in trtoolbox.svd)

S

s (trtoolbox.svd.Results attribute) salpha (trtoolbox.plothelper.PlotHelper attribute) save_to_files() (trtoolbox.globalanalysis.Results method) (trtoolbox.lda.Results method) (trtoolbox.svd.Results method) set_ks() (trtoolbox.globalanalysis.RateConstants method)

sfreq (trtoolbox.plothelper.PlotHelper attribute) show_svs() (in module trtoolbox.svd) spectral_offset (trtoolbox.globalanalysis.Results attribute) stime (trtoolbox.plothelper.PlotHelper attribute) style (trtoolbox.globalanalysis.RateConstants attribute) svddata (trtoolbox.svd.Results attribute) svdtraces (trtoolbox.globalanalysis.Results attribute)

T

taus (trtoolbox.lda.Results attribute) tcs (trtoolbox.expfit.Results attribute) (trtoolbox.globalanalysis.RateConstants attribute) (trtoolbox.globalanalysis.Results attribute) tcs_err (trtoolbox.globalanalysis.RateConstants attribute) tik() (in module trtoolbox.lda) tik_lstsq() (in module trtoolbox.lda) tiks() (in module trtoolbox.lda) time (trtoolbox.expfit.Results attribute)

traces (trtoolbox.expfit.Results attribute) trtoolbox (module) trtoolbox.expfit (module) trtoolbox.globalanalysis (module) trtoolbox.lda (module) trtoolbox.plothelper (module) trtoolbox.svd (module) tsvd() (in module trtoolbox.lda) type (trtoolbox.lda.Results attribute) (trtoolbox.svd.Results attribute)

U

u (trtoolbox.svd.Results attribute)

V

var (trtoolbox.expfit.Results attribute)

vt (trtoolbox.svd.Results attribute)

W

wrapper_svd() (in module trtoolbox.svd)

X

x_k (trtoolbox.lda.Results attribute)

xas (trtoolbox.globalanalysis.Results attribute)